The HTAN Data Portal is in the alpha release phase. Only level 3 and 4 data can be downloaded. Please send any questions or feedback to htan@googlegroups.com
Analysis Tools
Data Portal Integrations
Minerva
Minerva is a suite of software tools for interpreting and interacting with complex images, organized around a guided analysis approach.
CellxGene
CellxGene is an interactive viewer for single-cell expression.
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Explore single cell RNA Seq data in CellxGene
Analysis Pipelines
MCMICRO
MCMICRO is a software pipeline for generating single cell data from multiple tissue imaging technologies.
Integrations Coming Soon
cBioPortal
The cBioPortal for Cancer Genomics is an open-source software platform that enables interactive, exploratory analysis of large-scale cancer genomics data sets with a biologist-friendly interface
Luna Single Cell Viewer
Luna is a tool for publishing single cell data with highlighted observations and findings.
